BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011F05SP1|AL426242
(783 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1556 1544 0.0
>3x_Contig1556
Length = 10874
Score = 1544 bits (779), Expect = 0.0
Identities = 782/783 (99%)
Strand = Plus / Minus
Query: 1 gaatcgacactcattataattccagatctatcattgatcccatgccagctattgtcgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9315 gaatcgacactcattataattccagatctatcattgatcccatgccagctattgtcgttt 9256
Query: 61 cttcctctgctctctgtatcgtttaaatctctttttcccaatgatattgacgtaataatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9255 cttcctctgctctctgtatcgtttaaatctctttttcccaatgatattgacgtaataatt 9196
Query: 121 cccaatcatcttctttggtagatttaacacatatattgcatatcgctaacagtaattcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9195 cccaatcatcttctttggtagatttaacacatatattgcatatcgctaacagtaattcaa 9136
Query: 181 tcatcaactctcaaaacatatcatattcgctctttgcattgtttaattatggccggtgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9135 tcatcaactctcaaaacatatcatattcgctctttgcattgtttaattatggccggtgtg 9076
Query: 241 tgcctggttaacattattctatatttcattattcgttcttaaaatgatggccatttcttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9075 tgcctggttaacattattctatatttcattattcgttcttaaaatgatggccatttcttt 9016
Query: 301 aattcagtgctttcaaatcctcataactctatgtcaccgtaatagacatacccattgttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9015 aattcagtgctttcaaatcctcataactctatgtcaccgtaatagacatacccattgttt 8956
Query: 361 acttcggtttggttggacagtatcagtgcaataagaataaagtgtaacacaaaatactat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8955 acttcggtttggttggacagtatcagtgcaataagaataaagtgtaacacaaaatactat 8896
Query: 421 tgcaaagcagtattaccatatagtttcaatgaatgatctttaattctttcttcaataact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8895 tgcaaagcagtattaccatatagtttcaatgaatgatctttaattctttcttcaataact 8836
Query: 481 atacctacaatattgaaaattcaccatttgccagaattggtccatgtactggaaccgaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8835 atacctacaatattgaaaattcaccatttgccagaattggtccatgtactggaaccgaag 8776
Query: 541 ggcctgggcagaaactctggtcccagcctaggcattggttctgtgaatctgaattccagc 600
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8775 gggctgggcagaaactctggtcccagcctaggcattggttctgtgaatctgaattccagc 8716
Query: 601 ctggagggagagtttcctgggcaggactaggaaagccggacagagagactctgtgtctca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8715 ctggagggagagtttcctgggcaggactaggaaagccggacagagagactctgtgtctca 8656
Query: 661 gctccccctggcagaacggctcagtcttagaggaaaggaatatcggcagggggacgtctg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8655 gctccccctggcagaacggctcagtcttagaggaaaggaatatcggcagggggacgtctg 8596
Query: 721 cccaggacacccagccttaccacaattggactgccttgtgtaagtttttctgaaaaagtt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8595 cccaggacacccagccttaccacaattggactgccttgtgtaagtttttctgaaaaagtt 8536
Query: 781 tat 783
|||
Sbjct: 8535 tat 8533
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6032
Number of Sequences: 1807
Number of extensions: 6032
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 783
length of database: 10,358,551
effective HSP length: 16
effective length of query: 767
effective length of database: 10,329,639
effective search space: 7922833113
effective search space used: 7922833113
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)